AI-supercharged BLAST nucleotide analysis & in silico surveillance reports in minutes, not weeks!
What is Blast DeepSeq capable of?
Supercharge in-silico analysis & assay performance
- Automate post-market surveillance and report generation for DNA/RNA assays.
- Complete nucleotide BLAST alignments and variants analysis in minutes.
- Intelligent primer-probe in silico analysis for inclusivity and exclusivity.
- Accurate Primer and probe binding and qPCR performance prediction.
Automate primer-probe design verification & post-market surveillance
- Sequence analysis of qPCR oligonucleotides to ensure applicability and relevance of your assay’s ability to detect the target(s) of interest (inclusivity) and to avoid any potential false positive detection (exclusivity).
- BLAST DS can exclude your species of interest to specifically identify any potential cross-reactive species that may be detected by your assay.
- Displays oligonucleotide binding locations across all accessions.
- Provides alignment/homology information and includes primer-probe analysis to determine the assay’s ability to amplify and detect a given accession.
- Provides an overall detection rate based on the binding regions of your assay’s oligonucleotides to aid in empirical wet testing and optimization.
Accurate variant calling and annotation
- Harness the power of advanced algorithms designed for highly accurate variant calling and annotation—pinpointing genetic variations, mutations, and sequence anomalies with confidence.
- Identification of mutation/variant sequences present within the NCBI BLAST database for your amplicon/target of interest.
- Results are automatically grouped into accessions with identical sequences, allowing quick identification and downloading of all accessions with a given mutation/variant.
- Generate detailed reports for assay performance and inclusivity/exclusivity checks
AI summary reports and results visualization
- BLAST DS turns complex data into clarity with customizable reports that highlight your key findings.
- Powerful visualization tools—ranging from sequence alignments to variant frequency plots and heatmaps—make it easier than ever to interpret results and share insights with your team.
- BLAST DS results are analyzed and parsed into detected and not detected accession groups, allowing quick identification and separation of accessions.
- Automated report generation showing inclusivity, exclusivity, and mutation/variant analysis.
Explore BLAST DeepSeq Output
4.7 rating (130k)
We’ve been helping customers globally
Blast DeepSeq saves me so
much time. I can’t imagine going back to manually running my analysis.
Nikita R.
I am able to generate PMS
inclusivity and exclusivity reports in minutes instead of days. I am so happy with this tool.
Carol M.
Elena V.
Bill M.
George B.
Comprehensive plans with premium features
Choose a plan that works best for your business
Basic
$0
Features
Basic plan includes:
- Secure Cloud-based access
- Automated BLAST Query Analysis
- BLAST DeepSeq Oligo Binding Analysis
- BLAST DeepSeq qPCR Analysis
- Inclusivity & Exclusivity Filtering
- Sequence Alignment Maps
- Automated Sequence Classification and Grouping
- Inclusivity analysis summary report
- Variant analysis report
Plus
$50
Features
- Alignment and Grouping reports downloads
- Accession report downloads
- Print and copy enabled
- 48 hr analysis history
- 30% discount on token costs
- Analysis sharing
- List Item
Professional
$95
Features
Everything in Plus and
- 30-day analysis history
- 50% discount on token costs
Enterprise
Features
- Purchase order support
- User Management
- User roles
- Single sign-on (SSO) integration
- User defined analysis data storage period
- Audit trail
- Silo-ed VPC
- Custom solutions
Basic
$0 / month
Features
Basic plan includes:
- Secure Cloud-based access
- Automated BLAST Query Analysis
- BLAST DeepSeq Oligo Binding Analysis
- BLAST DeepSeq qPCR Analysis
- Inclusivity & Exclusivity Filtering
- Sequence Alignment Maps
- Automated Sequence Classification and Grouping
- Inclusivity analysis summary report
- Variant analysis report
Plus
$45 / month
Features
- Alignment and Grouping reports downloads
- Accession report downloads
- Print and copy enabled
- 48 hr analysis history
- 30% discount on token costs
- Analysis sharing
Professional
$85 / month
Features
Everything in Plus and
- 30-day analysis history
- 50% discount on token costs
Enterprise
Features
- Purchase order support
- User Management
- User roles
- Single sign-on (SSO) integration
- User defined analysis data storage period
- Audit trail
- Silo-ed VPC
- Custom solutions
Questions & answers
What is BLAST DeepSeq?
BLAST DeepSeq is an AI-powered in-silico analysis tool designed to automate and streamline assay sequence analysis for laboratories and diagnostics companies. It integrates advanced BLAST algorithms, taxonomy-based filtering, and mutation analysis to deliver accurate, rapid results.
Who can use BLAST DeepSeq?
BLAST DeepSeq is intended for research use only. It is suitable for molecular diagnostics companies, assay developers, bioinformatics teams, and research laboratories that need to validate or analyze primer, probe, and amplicon sequences.
How does BLAST DeepSeq work?
The tool uses NCBI database queries combined with custom AI-driven filtering rules to:
- Detect sequence matches
- Identify mismatches and mutations
- Filter results by taxonomy
- Generate detailed reports for assay performance and inclusivity/exclusivity checks
Is BLAST DeepSeq cloud-based or locally installed?
Currently, BLAST DeepSeq is available as a cloud-hosted solution. This ensures fast database access, regular updates, and no local installation requirements. Future versions may support on-premise deployment for enterprise customers.
What types of analysis can BLAST DeepSeq perform?
- Primer, probe, and amplicon validation
- Inclusivity and exclusivity testing
- Mismatch and mutation identification
- Taxonomy-based filtering
- Accession grouping and classification
Comprehensive plans with premium features
Features
Templates Access
Tone Personalization
Language Support
Sections Generator
Live Edits / Rewrites
Priority Support
White-label Export
BASIC
$ 0
Monthly cost
$ 0
Annual cost
Free of charge
Features
BLAST Analysis
Report downloads
Secure Cloud-based access
Plus
$ 0
Monthly cost
$ 0
Annual cost
For labs
Features
Everything in Basic and
DeepSeq BLAST
48 hr analysis history
Analysis sharing 1
Professional
$ 0
Monthly cost
$ 0
Annual cost
For researchers
Features
Everything in Plus and
30-day analysis history
User Management
Bulk Inclusivity & Exclusivity Analysis
ENTERPRISE
Features
Everything in Professional and
Purchase order support
User roles
Single sign-on (SSO) integration
User defined analysis data storage period
Audit trail
Silo-ed VPC
Custom solutions